USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: PFD5_HUMAN USC-OGP 2-DE database:  PFD5_HUMAN PFD5_HUMAN General information about the entry View entry in simple text format Entry name PFD5_HUMAN Primary accession number Q99471 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Prefoldin subunit 5; AltName: Full=C-Myc-binding protein Mm-1; AltName: Full=Myc modulator 1;. Gene name Name=PFDN5 Synonyms=MM1, PFD5 Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein PLATELET_4-7 {PLATELET 4-7} Homo sapiens (Human)   map experimental info   PLATELET_4-7 MAP LOCATIONS: SPOT OGP-0592: pI=5.65; Mw=14040 PLATELET_5-6 {PLATELET 5-6} Homo sapiens (Human)   map experimental info   PLATELET_5-6 MAP LOCATIONS: SPOT OGP-0853: pI=5.65; Mw=15330 Cross-references UniProtKB/Swiss-Prot Q99471; PFD5_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name PFD5_HUMAN Primary accession number Q99471 Secondary accession number(s) A8K9A8 Q54AA8 Q9C083 Q9C084 Sequence was last modified on  January 11, 2001 (version 2) Annotations were last modified on  March 15, 2017 (version 154) Name and origin of the protein Description RecName: Full=Prefoldin subunit 5; AltName: Full=C-Myc-binding protein Mm-1; AltName: Full=Myc modulator 1; Gene name Name=PFDN5 Synonyms=MM1, PFD5 Encoded on Name=PFDN5; Synonyms=MM1, PFD5 Keywords Acetylation; Alternative splicing; Chaperone; Complete proteome; Cytoplasm; Nucleus; Phosphoprotein; Reference proteome. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL D89667; BAA14006.1; ALT_INIT; mRNA EMBL AB055802; BAB32643.1; -; Genomic_DNA EMBL AB055803; BAB32644.1; -; mRNA EMBL AB055804; BAB32645.1; -; mRNA EMBL AB055805; BAB32646.1; -; mRNA EMBL BT007195; AAP35859.1; -; mRNA EMBL AK292623; BAF85312.1; -; mRNA EMBL AC073611; -; NOT_ANNOTATED_CDS; Genomic_DNA EMBL CH471054; EAW96683.1; -; Genomic_DNA EMBL CH471054; EAW96685.1; -; Genomic_DNA EMBL BC003373; -; NOT_ANNOTATED_CDS; mRNA EMBL BC062671; AAH62671.1; -; mRNA CCDS CCDS8853.1; -. [Q99471-1]; . CCDS CCDS8854.1; -. [Q99471-3]; . RefSeq NP_002615.2; NM_002624.3. [Q99471-1]; . RefSeq NP_665904.1; NM_145897.2. [Q99471-3]; . UniGene Hs.655327; -; . ProteinModelPortal Q99471; -; . SMR Q99471; -; . BioGrid 111226; 76; . DIP DIP-28155N; -; . IntAct Q99471; 141; . MINT MINT-5003456; -; . STRING 9606.ENSP00000334188; -; . iPTMnet Q99471; -; . PhosphoSitePlus Q99471; -; . BioMuta PFDN5; -; . DMDM 12231038; -; . OGP Q99471; -; . EPD Q99471; -; . MaxQB Q99471; -; . PaxDb Q99471; -; . PeptideAtlas Q99471; -; . PRIDE Q99471; -; . TopDownProteomics Q99471-1; -. [Q99471-1]; . TopDownProteomics Q99471-3; -. [Q99471-3]; . DNASU 5204; -; . Ensembl ENST00000243040; ENSP00000243040; ENSG00000123349. [Q99471-2]; . Ensembl ENST00000334478; ENSP00000334188; ENSG00000123349. [Q99471-1]; . Ensembl ENST00000351500; ENSP00000266964; ENSG00000123349. [Q99471-3]; . Ensembl ENST00000551018; ENSP00000447942; ENSG00000123349. [Q99471-1]; . GeneID 5204; -; . KEGG hsa:5204; -; . UCSC uc001scl.5; human. [Q99471-1]; . CTD 5204; -; . DisGeNET 5204; -; . GeneCards PFDN5; -; . HGNC HGNC:8869; PFDN5; . HPA HPA008587; -; . MIM 604899; gene; . neXtProt NX_Q99471; -; . OpenTargets ENSG00000123349; -; . PharmGKB PA33210; -; . eggNOG KOG3048; Eukaryota; . eggNOG COG1730; LUCA; . GeneTree ENSGT00390000008783; -; . HOGENOM HOG000207562; -; . HOVERGEN HBG004539; -; . InParanoid Q99471; -; . KO K04797; -; . OMA MQIKQEF; -; . OrthoDB EOG091G0TVG; -; . PhylomeDB Q99471; -; . TreeFam TF106509; -; . Reactome R-HSA-389957; Prefoldin mediated transfer of substrate to CCT/TriC; . ChiTaRS PFDN5; human; . GeneWiki PFDN5; -; . GenomeRNAi 5204; -; . PRO PR:Q99471; -; . Proteomes UP000005640; Chromosome 12; . Bgee ENSG00000123349; -; . CleanEx HS_PFDN5; -; . ExpressionAtlas Q99471; baseline and differential; . Genevisible Q99471; HS; . GO GO:0005737; C:cytoplasm; TAS:UniProtKB; . GO GO:0005634; C:nucleus; TAS:ProtInc; . GO GO:0016272; C:prefoldin complex; IBA:GO_Central; . GO GO:0003714; F:transcription corepressor activity; TAS:ProtInc; . GO GO:0090090; P:negative regulation of canonical Wnt signaling pathway; IMP:BHF-UCL; . GO GO:0045892; P:negative regulation of transcription; DNA-templated; IMP:BHF-UCL GO GO:0006457; P:protein folding; IEA:InterPro; . GO GO:0006355; P:regulation of transcription; DNA-templated; TAS:ProtInc GO GO:0060041; P:retina development in camera-type eye; IEA:Ensembl; . Gene3D 1.10.287.370; -; 1; . HAMAP MF_00308; PfdA; 1; . InterPro IPR011599; PFD_alpha_archaea; . InterPro IPR009053; Prefoldin; . InterPro IPR004127; Prefoldin_subunit_alpha; . Pfam PF02996; Prefoldin; 1; . SUPFAM SSF46579; SSF46579; 1; . TIGRFAMs TIGR00293; TIGR00293; 1; .

Gateways to other related servers

• The World-2DPAGE Constellation - Entry point to the world-wide 2-DPAGE resources.
• World-2DPAGE Repository - A public repository for gel-based proteomics data linked to protein identification published in the literature.
• World-2DPAGE Portal - A dynamic portal to query simultaneously world-wide gel-based proteomics databases.
• SWISS-2DPAGE - The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
• ExPASy - The resources web server of the Swiss Institute of Bioinformatics

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